FastQC Report![[OK]](Icons/tick.png)
Basic Statistics
| Measure | Value |
|---|---|
| Filename | lane4_Index7_2.fq |
| File type | Conventional base calls |
| Encoding | Illumina 1.5 |
| Total Sequences | 21762435 |
| Filtered Sequences | 0 |
| Sequence length | 90 |
| %GC | 49 |
Per base sequence quality
Per sequence quality scores
![[FAIL]](Icons/error.png)
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
![[WARN]](Icons/warning.png)
Kmer Content
| Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCAGG | 4593125 | 2.5962195 | 5.596691 | 1 |
| GAAGA | 4614175 | 2.5908659 | 5.0400386 | 2 |
| CCTGG | 4547260 | 2.5495982 | 6.104159 | 1 |
| AAGAA | 4649000 | 2.543823 | 5.0180798 | 2 |
| CTTCT | 4847470 | 2.5396135 | 6.175586 | 1 |
| CTGGA | 4395950 | 2.4565947 | 9.616273 | 1 |
| TCCAG | 4335655 | 2.368935 | 6.031314 | 2 |
| CTGCT | 4321250 | 2.3420522 | 5.44919 | 1 |
| CTCCT | 4346805 | 2.3034298 | 8.327255 | 1 |
| CTGGG | 3987615 | 2.2867439 | 9.196591 | 1 |
| CAGGA | 3993240 | 2.2496629 | 5.7014947 | 1 |
| CTTCA | 4213770 | 2.2255354 | 6.2925086 | 1 |
| CTCCA | 4097475 | 2.1889324 | 8.863852 | 1 |
| CCCAG | 3933775 | 2.1740038 | 7.7398686 | 1 |
| CAGAA | 3845060 | 2.110919 | 5.243381 | 1 |
| CTCTG | 3743920 | 2.029148 | 6.943556 | 1 |
| CTGCA | 3639905 | 1.988788 | 5.2189183 | 1 |
| CTTCC | 3703095 | 1.9623195 | 5.12678 | 1 |
| CTGGC | 3354905 | 1.8810579 | 5.855265 | 1 |
| TGGAA | 3374100 | 1.8793063 | 5.4103456 | 2 |
| CTGAA | 3422615 | 1.8638686 | 6.0821524 | 1 |
| CTTTT | 3513640 | 1.8199414 | 5.249128 | 1 |
| CTGAG | 3112630 | 1.7394353 | 5.4096794 | 1 |
| CTCAG | 3179990 | 1.7374976 | 6.666189 | 1 |
| CTTTG | 3180170 | 1.7040612 | 5.4099927 | 1 |
| CTGGT | 3001165 | 1.6636403 | 5.504415 | 1 |
| CTTGG | 2970770 | 1.6467916 | 5.769324 | 1 |
| CTCCC | 2877965 | 1.5425621 | 5.6125584 | 1 |